Contents

• Introduction
  • Reproducibility in science
  • Reproducibility crisis
  • Reasons of reproducibility crisis
  • Motivations for reproducible research
  • Three steps to more reproducible research
• Preregistration
  • Types of preregistration
  • How to make a preregistration?
    • Domain-agnostic template
    • fMRI research template
  • Rules of preregistration
  • Why all researchers should preregister their studies?
• Data sharing
  • Ethical approval
  • Data user agreement
  • Anonymization process
  • Open data sharing platforms
  • Attach a license
• Data structure
  • Brain Imaging Data Structure
  • Create a BIDS compatible dataset
  • Data format conversion
• Data management
  • Basics
  • Data storage
• Analysis worflows
• Code management
  • Version control system
  • Testing a code
  • Documenting a code
  • Containers
  • Makefiles
  • Code folder structure
• Different data types
  • EEG and MEG
    • EEG-BIDS
    • MEG-BIDS
    • MEG + EEG Analysis & Visualization
  • fMRI